Korea Polar Data Center
Scientific observations and results from Antarctica shall
be exchanged and made freely available
be exchanged and made freely available
Transcriptome data of Antarctic icefish
For gene annotation of Champsocephalus gunnari, twelve tissues comprising the brain, egg, esophagus, eye, fin, heart, kidney, muscle, skin, spinal, spleen, and stomach were dissected and subsequently stored in RNAlater (Ambion, Inc., Austin, TX, USA) solution for RNA extraction. The total RNA was extracted from each tissue using the RNeasy Mini Kit (Qiagen) according to the manufacturer’s instructions. For constructing the library, total RNA was used and sequencing was performed on the Illumina HiSeq 2000 platform.
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- Entry ID
- KOPRI-KPDC-00002641
- Copyright
- ISO Topic
- Biota
- Personnel
- Seung Chul Shin (ssc@kopri.re.kr)
- Jin-Hyoung Kim (kimjh@kopri.re.kr)
- Research period
- 2024-01-16 ~ 2024-03-16
- Create/Update Date
- 2024-10-16 / 2024-10-16
- Location
- OCEAN > SOUTHERN OCEAN > DRAKE PASSAGE
- Citation
- The data(KOPRI-KPDC-00002641) used in this work was provided by the Korea Polar Research Institute.
- Spatial Coverage
-
POINT
- lat:-58.758533, lon:-59.504931
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Legend
- Raw Data
- File Size 5.14 Gb for 4 items
| Category | File Name | Description | Size | Status |
|---|---|---|---|---|
| Rawdata | 1_Egg_mR_1.fastq.gz | RNA-Seq data | 1.34 Gb | Request required |
| Rawdata | 1_Egg_mR_2.fastq.gz | RNA-Seq data | 1.33 Gb | Request required |
| Rawdata | 1_Muscle_mR_1.fastq.gz | RNA-Seq data | 1.24 Gb | Request required |
| Rawdata | 1_Muscle_mR_2.fastq.gz | RNA-Seq data | 1.23 Gb | Request required |