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KPDC, Korea Polar Data Center

Korea Polar Data Center Scientific observations and results from Antarctica shall
be exchanged and made freely available

USFinder: a software to find Amplicon Sequence Variants

The USFinder Python script is designed to find Amplicon Sequence Variants (ASVs) by following a series of steps

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Entry ID
DOI
https://dx.doi.org/doi:10.22663/KOPRI-KPDC-00002439.1
Copyright
Personnel
  • Soon Gyu Hong (polypore@kopri.re.kr)
Create/Update Date
2023-12-27 / 2023-12-27
Citation
The data(KOPRI-KPDC-00002439) used in this work was provided by the Korea Polar Research Institute.

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File Size 216.44 Kb for 5 items
Category File Name Description Size Status
Rawdata Manual_USFinder.pdf manual for USFinder 174.41 Kb Download
Rawdata sampleInfo_example_kpmdFasta.txt example sample information file for kpmd fasta sequence file 540 Bytes Download
Rawdata sampleInfo_example.txt example sample information file for regular fasta sequence file 972 Bytes Download
Rawdata sampleInfo_example.xlsx example template Excel file for sample information 10.97 Kb Download
Rawdata USFinder.pyc python script 29.56 Kb Download