Korea Polar Data Center
Scientific observations and results from Antarctica shall
be exchanged and made freely available
be exchanged and made freely available
trimPB: a software to debarcode PacBio sequences
trimPBis a python script to trim priming regions, decode according to barcodes sequences generated by PacBio. It handles sequences in fastQ files. Sequence files contain sequences for diverse PCR amplicons produced by diverse primers with barcode. It recognizes primer sequences first to sort different genetic loci and then barcode to sort different samples.
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- Entry ID
- KOPRI-KPDC-00003124
- Copyright
- Personnel
- Soon Gyu Hong (polypore@kopri.re.kr)
- Create/Update Date
- 2026-06-10 / 2026-06-10
- Citation
- The data(KOPRI-KPDC-00003124) used in this work was provided by the Korea Polar Research Institute.
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Legend
- Raw Data
- File Size 13.75 Mb for 4 items
| Category | File Name | Description | Size | Status |
|---|---|---|---|---|
| Rawdata | Manual_trimPB_English.docx | manual of trimPB | 262.29 Kb | Download |
| Rawdata | trimInfo_Example.txt | example trimInfo file | 1.47 Kb | Download |
| Rawdata | trimInfo_Example.xlsx | example Excel file for preparation of trimInfo | 13.45 Mb | Download |
| Rawdata | trimPB.pyc | python script | 31.28 Kb | Download |