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KPDC, Korea Polar Data Center

Korea Polar Data Center Scientific observations and results from Antarctica shall
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Whole Genome of OP9 Lineage

Members of candidate phylum OP9 are found in geothermal systems, petroleum reservoirs, anaerobic digesters, wastewater treatment facilities, and marine sediments. In this study, 8 single-cell genomes (SCGs) of OP9, which was predominant composing 26.7% in the marine sediments of the Ross Sea, Antarctica was obtained through single-cell sequencing. Eight SCGs showed high 16S rRNA gene identity (>99.3%) each other while they had low 16S rRNA gene similarities ( -Yet, little information regarding their metabolic capabilities and ecological role within such habitats is currently available due to the lack of cultured isolates. -As a first study on the OP9 genome from Antarctic marine sediment, more detailed analyses will provide the glimpse into the lifestyle of a member of widely distributed, yet poorly understood bacterial candidate division OP9.

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Entry ID
DOI
https://dx.doi.org/doi:10.22663/KOPRI-KPDC-00000957.1
Copyright
Science Keyword
ISO Topic
Biota
Instruments
ADS(Automated DNA Sequencer)
Personnel
  • Yung Mi Lee (ymlee@kopri.re.kr)
Project
Create/Update Date
2017-07-17 / 2017-07-17
Location
Ocean > Southern Ocean > Ross Sea > Marine sediments of the Ross Sea > Antarctica
Dataset
Whole Genome of OP9 Lineage Polar Resoureces Preservation & Management System Installation Hong Kum Lee
Citation
The data(KOPRI-KPDC-00000957) used in this work was provided by the Korea Polar Research Institute.

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Rawdata KPDC_OP9_2015.zip 1.23 Mb Request required